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Central Siberian Botanical Garden Herbarium (NS, NSK)
Version 1.0 published by Central Siberian Botanical Garden SB RAS on Feb 3, 2020
Herbarium collections are the most important source of scientific information about the distribution of objects in the past and the present, which allows simulation the dynamics of objects in the future. Only the herbarium sample reliably confirms the presence of the plant organism in a specific point of space in a certain period of time.
Herbarium collections and the data they hold are valuable for more traditional studies of taxonomy and systematic, but also for ecology, bioengineering, conservation, food security, and the human social and cultural elements of scientific collection. The value and universality of herbarium specimens are recognized in most countries, where national and large regional herbariums are actively developing and improving.
The creation of Virtual or Digital herbarium became a modern trend, stage of the inventory and modernization of herbarium collections of the leading Botanical institutions in the world. Our aim is to provide online access to CSBG SB RAS herbarium collections as a worldwide resource for biodiversity study. Writing the long-awaited “Flora of Russia” would be greatly accelerated in the presence of network centers of Digital herbarium collections of Botanical institutions in Russia.
The first herbarium at the Central Siberian Botanical Garden (CSBG SB RAS), Novosibirsk, Russia was organized in 1946. Now there are two herbarium collections in CSBG with their own acronyms and registrations in the Index Herbariorum (NSK and NS). Collection contains about 800,000 herbarium specimens of higher vascular plants, mosses, lichens and fungi sampled in Siberia, Russian Far East, Europe, Asia and America.
Data Records
The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 17,461 records. 1 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.
- Occurrence (core)
- Multimedia
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Downloads
Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:
| Data as a DwC-A file | download 17,461 records in Russian (2 MB) - Update frequency: unknown |
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| Metadata as an EML file | download in English (29 KB) |
| Metadata as an RTF file | download in English (16 KB) |
Versions
The table below shows only published versions of the resource that are publicly accessible.
How to cite
Please be aware, this is an old version of the dataset. Researchers should cite this work as follows:
Kovtonyuk N, Han I, Gatilova E (2020): Central Siberian Botanical Garden Herbarium (NS, NSK). v1.0. Central Siberian Botanical Garden SB RAS. Dataset/Occurrence. http://www.csbg.nsc.ru:8080/ipt/resource?r=csbg2020&v=1.0
Rights
Researchers should respect the following rights statement:
The publisher and rights holder of this work is Central Siberian Botanical Garden SB RAS. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.
GBIF Registration
This resource has been registered with GBIF, and assigned the following GBIF UUID: e4fd8292-95cb-4f49-a639-e59c89e82045. Central Siberian Botanical Garden SB RAS publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Participant Node Managers Committee.
Keywords
Occurrence; Specimen
Contacts
Who created the resource:
Who can answer questions about the resource:
Who filled in the metadata:
Who else was associated with the resource:
Geographic Coverage
In the dataset specimens from 37 countries of Europe, Asia, America, Africa and Australia are presented, most of them are from Russia.
| Bounding Coordinates | South West [-31.9, -178.7], North East [75.65, 179.6] |
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Taxonomic Coverage
General dataset of digitized NS and NSK collections of the Central Siberian Botanical Gardens SB RAS contains 17460 specimens of 161 families excepting datasets with families Primulaceae, Geraniaceae, genera Allium, Medicago, Rhododendron and Nitraria komarovii, which were published earlier. 33 families with more than 100 specimens in each are listed.
| Family | Equisetaceae, Poaceae, Asteraceae, Fabaceae, Boraginaceae, Cystopteridaceae, Cyperaceae, Orchidaceae, Ranunculaceae, Typhaceae, Rosaceae, Athyriaceae, Amaranthaceae, Brassicaceae, Salicaceae, Plumbaginaceae, Caryophyllaceae, Ericaceae, Lamiaceae, Liliaceae, Dryopteridaceae, Apiaceae, Betulaceae, Orobanchaceae, Papaveraceae, Campanulaceae, Iridaceae, Juncaceae, Pteridaceae, Plantaginaceae, Aspleniaceae, Polygonaceae, Gentianaceae |
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Temporal Coverage
| Start Date / End Date | 1813-03-01 / 2019-08-14 |
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Project Data
The first herbarium at the Central Siberian Botanical Garden (CSBG SB RAS), Novosibirsk, Russia was organized in 1946. Now there are two herbarium collections in CSBG with their own acronyms and registrations in the Index Herbariorum (NSK and NS). Collection contains about 800,000 herbarium specimens of higher vascular plants, mosses, lichens and fungi sampled in Siberia, Russian Far East, Europe, Asia and America.
| Title | Central Siberian Botanical Garden Herbarium (NS, NSK) |
|---|---|
| Study Area Description | In the dataset specimens from 37 countries of Europe, Asia, America, Africa and Australia are presented, most of them are from Russia. |
| Design Description | Our aim is to provide online access to CSBG SB RAS herbarium collections as a worldwide resource for biodiversity study. Writing the long-awaited “Flora of Russia” would be greatly accelerated in the presence of network centers of Virtual herbarium collections of Botanical institutions in Russia. |
The personnel involved in the project:
Sampling Methods
The digitization results are published in the open access as 8 datasets on the Global Biodiversity Information Facility (GBIF) portal using the Integrated Publishing Toolkit (IPT) installed on the CSBG server.
| Study Extent | The Digital Herbarium of the Central Siberian Botanical Garden of SB RAS began to be created on the taxonomic basis in 2017. Completely digitized herbarium specimens of genera Allium, Geranium, Medicago, Rhododendron, family Primulaceae, rare plants of Siberian flora, as well as type specimens of vascular plants stored in NS and NSK collections at the CSBG SB RAS. |
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Method step description:
- Digitization is performed on two ObjectScan 1600 scanners (Microtek) using software ScanWizard-Botany and MiVapp-Botany according to the international standards, at 600 dpi, with a barcode, 24-color scale and spatial scale bar. The Digital Herbarium is created as a network resource on biodiversity, the materials of which can be used in GBIF, for taxonomic treatments in the preparation of “Flora of Russia”, in various types of scientific research and educational purposes.
Collection Data
| Collection Name | I.M.Krasnoborov Herbarium |
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| Collection Identifier | NS |
| Collection Name | M.G. Popov Herbarium |
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| Collection Identifier | NSK |
| Specimen preservation methods | Dried and pressed |
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Bibliographic Citations
- Kovtonyuk N.K., Tomoshevich M.A., Banaev E.V. (2019). Typification of the name Nitraria komarovii (Nitrariaceae) // BOTANICA PACIFICA: A JOURNAL OF PLANT SCIENCE AND CONSERVATION V. 8. No 2. P. 115-118. DOI: 10.17581/bp.2019.08210
- Kovtonyuk N.K., Han I.V., Gatilova E.A. Family Primulaceae in digital herbarium of the Central Siberian Botanical Garden SB RAS // Rast. Mir Asian. Russia 2018, № 4 (32). С. 19-29. DOI:10.21782/RMAR1995-2449-2018-4(19-29).
- Kovtonyuk N., Han I. and Gatilova E. Digitization of the herbarium specimens of higher vascular plants in the Central Siberian Botanical Garden // Skvortsovia, 2018. - Vol. 4 (3). - P. 100-111. http://skvortsovia.uran.ru/2018/4302.pdf
- Kovtonyuk N., Han I., Gatilova E. (2019). Digital Herbarium Collections of the Central Siberian Botanical Garden SB RAS, Novosibirsk, Russia. In: Bychkov I., Voronin V. (eds) Information Technologies in the Research of Biodiversity. Springer Proceedings in Earth and Environmental Sciences. Springer, Cham. – pp. 22–27. DOI: https://doi.org/10.1007/978-3-030-11720-7_4
- Kovtonyuk N.K., Han I.V., Gatilova E.A., Pshenichkina Yu.A. Digital Herbarium of the CSBG SB RAS in Global Biodiversity Information Facilities // Rast. Mir Asian. Russia 2019, № 4 (36). С. 68–73. DOI: 10.21782/RMAR1995-2449-2019-4(68-73).
- Kovtonyuk, N.K.: Virtual herbarium collections as a resource for taxonomy and biodiversity study. Rast. Mir Asian. Russia 1(25), 98–104 (2017) DOI:10.21782/RMAR1995-2449-2017-1(98-104).
- Kovtonyuk N, Han I, Gatilova E (2019). Family Primulaceae in Digital Herbaria of CSBG SB RAS (NSK). Version 1.7. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/zw7jnn
- Kovtonyuk N, Han I, Gatilova E (2019). Family Primulaceae in Digital Herbaria of CSBG SB RAS (NS). Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/be6owh
- Kovtonyuk N, Han I, Gatilova E, Friesen N (2019). Genus Allium in CSBG SB RAS herbarium collections (NS,NSK). Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/e4hv2e https://doi.org/10.15468/e4hv2e
- Kovtonyuk N, Han I, Gatilova E, Karakulov A (2019). Genus Rhododendron in Digital herbarium of CSBG SB RAS (NS, NSK). Version 1.2. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/67ouin
- Kovtonyuk N, Han I, Gatilova E (2019). Genus Medicago (Fabaceae) in CSBG Herbarium collections (NS, NSK). Version 1.4. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/jvrxeh
- Kovtonyuk N, Han I, Ovchinnikova S, Nikiforova O, Vlasova N, Shekhovtsova I, Doron′kin V, Troshkina V, Pinzhenina E, Belyaeva I, Eremin I (2019). Typotheca of the higher vascular plants stored in M.G. Popov Herbarium (NSK) at the Central Siberian botanical garden SB RAS. Version 1.5. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/qdfdqq
- Tomoshevich M, Banaev E, Ak-Lama T, Kovtonyuk N, Han I (2019). Nitraria komarovii in the Digital herbarium of CSBG SB RAS (NSK). Version 1.2. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/jp2qco
Additional Metadata
| Purpose | Our aim is to provide online access to CSBG SB RAS herbarium collections as a worldwide resource for biodiversity study. Writing the long-awaited “Flora of Russia” would be greatly accelerated in the presence of network centers of Virtual herbarium collections of Botanical institutions in Russia. |
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| Alternative Identifiers | http://www.csbg.nsc.ru:8080/ipt/resource?r=csbg2020 |